MIRA: "MIRA 2 - Whole Genome Shotgun and EST Sequence Assembler
The MIRA2 system is the successor of MIRA. Additional years of knowledge and experience were incorporated, new algorithms devised, reliability and execution speed improved. Labs find mira2 useful for assembly of extremely 'unfriendly' projects containing lots of repetitive sequences. The miraEST module is suited for assembly of non-normalised EST projects and for detecting single nucleotide polymorphisms (SNP) in the transcriptome sequences. As always, your mileage may vary."
