Wednesday, January 31, 2007

Main Page - BioWeka

Main Page - BioWeka: "BioWeka is an extension library to the data mining framework Weka for knowledge discovery and data analysis tasks in biology, biochemistry and bioinformatics."
Given the growing amount of biological data, data mining methods have become an integral part of bioinformatics research. Unfortunately, standard data mining tools are often not sufficiently equipped for handling raw data such as e.g. amino acid sequences. One popular and freely available framework that contains many well-known data mining algorithms is the Waikato Environment for Knowledge Analysis (Weka). In the BioWeka project, we introduce various input formats for bioinformatics data and bioinformatics methods like alignments to Weka. This allows users to easily combine them with Weka's classification, clustering, validation and visualisation facilities on a single platform and therefore reduces the overhead of converting data between different data formats as well as the need to write custom evaluation procedures that can deal with many different programs. We encourage users to participate in this project by adding their own components and data formats to BioWeka. AVAILABILITY: The software, documentation and tutorial are available at http://www.bioweka.org

Tuesday, January 30, 2007

GWT Developer's Tools

GWT Developer's Tools: "gwtDeveloper is a WYSIWYG tool to design your GWT applications. It is a extension for JDeveloper. You can get it using JDeveloper's Check for Updates mechanism.

Windows version is available now. Linux/Mac version may be in the future.

See it's documents.

GWT UI Editor
Features:

* Visually design your panels, composites, menus and other widget types
* View, change your widget's properties using Property Inspector
* Add event handlers to your widgets"

Friday, January 26, 2007

BioPHP. PHP for bioinformatics

BioPHP. PHP for bioinformatics: "BioPHP PHP for Bioinformatics
The aim of this site is to share knowledge by using a Wiki-like service: classes, functions
and minitools may be edited by registered users.

Publish Videos of Your Experiments Online - for Free

Biotechnology Information Center News: Publish Videos of Your Experiments Online - for Free

The Journal of Visualized Experiments (2006-) is truly living up to the old adage that a picture is worth a thousand words. This online, open access journal is

publishing visualized (video-based) biological research studies. This publication aims to solve some of the most difficult problems in the contemporary life science research:
  • low transparency and reproducibility of biological experiments
  • time-consuming learning of experimental techniques

Monday, January 22, 2007

Prototype Javascript Library easing the development of dynamic web applications

Prototype Javascript Library easing the development of dynamic web applications: "Prototype is a JavaScript Framework that aims to ease development of dynamic web applications.

Featuring a unique, easy-to-use toolkit for class-driven development and the nicest Ajax library around, Prototype is quickly becoming the codebase of choice for web application developers everywhere."

Sunday, January 21, 2007

PortableUSBApps.com

PortableUSBApps.com

PortableUSBApps.com welcomes you to the future of USB drives! It's an exciting revolution and a new paradigm on portable computing. Hope you enjoy the applications that I have optimized and enabled for USB drives!"

WeBuilder 2006 - HTML editor, CSS, JavaScript, VBScript, PHP, ASP, SSI, WML, Perl editor

WeBuilder 2006 - HTML editor, CSS, JavaScript, VBScript, PHP, ASP, SSI, WML, Perl editor: "Create and edit any web page code faster and easier.
More screenshots

WeBuilder is revolutionary all-in-one web code editor for all your web document editing needs. Clean and convenient interface, quick startup, true flexibility and powerful features allow you to create and edit HTML, CSS, JavaScript, VBScript, PHP, ASP, SSI, Perl code faster and easier than ever, while integrated tools enable you to validate, reuse, navigate and deploy your code in an efficient and sophisticated manner.

Benefits for professionals

* Edit HTML, CSS, JavaScript, PHP, ASP within single program
* Clean, lightweight and extremely fast loading
* Familiar interface allows to jumpstart
* All essential code editing features are right at their place
* Fully customizable text editor, menus, toolbars, shortcut keys
* Efficiently reuse common code fragments
* Few click FTP upload or update"

PortableWebAp - PHP on USB or CD and More

PortableWebAp - PHP on USB or CD and More: "PortableWebAp is a portable platform for web applications. With it you can run php web applications from a CDROM, DVD, USB Drive, from any directory from any hard drive. No installation is necessary. "

Features:
Less than 5mb
By default runs on port 800
Port can be changed
PHP Command Line Interface
Runs in System Tray
Run from any hard drive, CD, DVD, or USB thumb drive.
Run from any directory.
Hotkeys support
Example PHP code for sessions, COM, running a hidden command line, file upload, and more...
Simple example of an appication using PHP, PDO, and SQLite.
A free graphical tool for SQLite Database Browser.
If the example application is run from CD or other read only environment then the SQLite database is automatically copied to the Windows temp directory and used from there.

Tuesday, January 09, 2007

MyReview

MyReview is an open-source web application for managing the paper submission and paper review phases. We aim at providing the most complete, powerful and flexible software of its kind

MyReview is implemented with PHP and MySQL, and distributed under the GNU General Public Licence.

Friday, January 05, 2007

AFLAX

AFLAX: The AJAX Library for the Adobe Flash™ Platform: "AFLAXtm (Wikipedia Entry) stands for Asynchronous Flash and XML. Defined simply, AFLAX is a development methodology which combines Ajax and Flash to create more dynamic web based applications.

Developed by Paul Colton, the AFLAX technology is available as a library that enables developers to use JavaScript to fully utilize all of the features of Adobe's Flash runtime -- including graphics, networking, video and camera support."

Ajax again

MooTools http://www.mootools.net
jQuery http://jquery.com/
SmoothSlideshow the lib’s website !
Script.aculo.us framework learn here
sharing/hosting/storing sites DivShare
Ajax DNS
graphing calculator fooplot
calc5.com/#2+2
real-time HTML editor, Real-time HTML Editor
Web 2.0 Logo Creator by Alex P
Ajaxload, generate an animated loading GIF
ajaxTunes
Relay PHP-based directory manager
Aptana JavaScript IDE